Vulcanococcus sp000179235
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Cyanobacteria; c__Cyanobacteriia; o__PCC-6307; f__Cyanobiaceae; g__Vulcanococcus; s__Vulcanococcus sp000179235
Filtered NCBI Taxonomy d__Bacteria; p__Cyanobacteria; c__; o__Synechococcales; f__Synechococcaceae; g__Synechococcus; s__
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; x__Cyanobacteria/Melainabacteria group; p__Cyanobacteria; o__Synechococcales; f__Synechococcaceae; g__Synechococcus; s__Synechococcus sp. CB0101
NCBI Strain Identifiers CB0101
GTDB Type Material Designation not type material
GTDB Representative of Species True (1 genome in species cluster)
Genome Characteristics
CheckM Completeness 100.0%
CheckM Contamination 0.54%
CheckM Strain Heterogeneity 0.0
5S Count 3
16S Count 3
23S Count 3
tRNA Count 20
Contig Count 1
N50 Contigs 2,789,647 bp
Longest Contig 2,789,647 bp
Scaffold Count 1
N50 Scaffolds 2,789,647 bp
Longest Scaffold 2,789,647 bp
Genome Size 2,789,647 bp
Protein Count 3,071
Coding Density 89.99%
GC Percentage 64.06%
Ambiguous Bases 23
GTDB representative of species True
NCBI Metadata
Assembly Level Complete Genome
Assembly Name ASM17923v2
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN00010394
Country None
Date 2019-04-30
Genbank Assembly Accession GCA_000179235.2
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source Chesapeake Bay
Latitude Longitude None
Molecule Count 1
CDS Count 2,972
Refseq Category na
Seq Rel Date 2019/04/30
Spanned Gaps 0
Species Taxid 232348
SSU Count 3
Submitter Gordon and Betty Moore Foundation Marine Microbiology Initiative
Taxid 232348
Total Gap Length 0
Translation Table 11
tRNA Count (total) 46
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master None