Ktedonobacter racemifer
Isolate LQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Chloroflexota; c__Ktedonobacteria; o__Ktedonobacterales; f__Ktedonobacteraceae; g__Ktedonobacter; s__Ktedonobacter racemifer
Filtered NCBI Taxonomy d__Bacteria; p__Chloroflexi; c__Ktedonobacteria; o__Ktedonobacterales; f__Ktedonobacteraceae; g__Ktedonobacter; s__Ktedonobacter racemifer
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Chloroflexi; c__Ktedonobacteria; o__Ktedonobacterales; f__Ktedonobacteraceae; g__Ktedonobacter; s__Ktedonobacter racemifer; x__Ktedonobacter racemifer DSM 44963
NCBI Strain Identifiers SOSP1-21
GTDB Type Material Designation type strain of species
GTDB Representative of Species True (1 genome in species cluster)
Genome Characteristics
CheckM Completeness 99.67%
CheckM Contamination 11.0%
CheckM Strain Heterogeneity 27.27
5S Count 7
16S Count 8
23S Count 8
tRNA Count 20
Contig Count 12
N50 Contigs 2,281,316 bp
Longest Contig 2,916,502 bp
Scaffold Count 10
N50 Scaffolds 2,766,182 bp
Longest Scaffold 3,837,106 bp
Genome Size 13,661,586 bp
Protein Count 12,900
Coding Density 81.39%
GC Percentage 53.79%
Ambiguous Bases N/A
GTDB representative of species True
NCBI Metadata
Assembly Level Scaffold
Assembly Name ASM17885v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02441796
Country Italy: Gerenzano
Date 2010-06-04
Genbank Assembly Accession GCA_000178855.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source soil sample
Latitude Longitude None
Molecule Count N/A
CDS Count 12,058
Refseq Category representative genome
Seq Rel Date 2010/06/04
Spanned Gaps 2
Species Taxid 363277
SSU Count 8
Submitter US DOE Joint Genome Institute (JGI-PGF)
Taxid 485913
Total Gap Length 45
Translation Table 11
tRNA Count (total) 60
Type Material assembly from type material
Unspanned Gaps 0
Version Status latest
WGS Master ADVG00000000.1