Actinobacillus lignieresii
Isolate HQ 16S/23S 18 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Pasteurellaceae; g__Actinobacillus; s__Actinobacillus lignieresii
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Pasteurellales; f__Pasteurellaceae; g__Actinobacillus; s__Actinobacillus pleuropneumoniae
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Pasteurellales; f__Pasteurellaceae; g__Actinobacillus; s__Actinobacillus pleuropneumoniae; x__Actinobacillus pleuropneumoniae serovar 10; x__Actinobacillus pleuropneumoniae serovar 10 str. D13039
NCBI Strain Identifiers D13039
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_900444945.1)
Genome Characteristics
CheckM Completeness 99.66%
CheckM Contamination 0.3%
CheckM Strain Heterogeneity 50.0
5S Count 0
16S Count 1
23S Count 1
tRNA Count 18
Contig Count 44
N50 Contigs 110,393 bp
Longest Contig 199,745 bp
Scaffold Count 44
N50 Scaffolds 110,393 bp
Longest Scaffold 199,745 bp
Genome Size 2,272,088 bp
Protein Count 2,146
Coding Density 89.20%
GC Percentage 41.19%
Ambiguous Bases N/A
GTDB representative GCA_900444945.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM17859v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02469621
Country None
Date 2010-09-13
Genbank Assembly Accession GCA_000178595.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 2,132
Refseq Category na
Seq Rel Date 2010/09/13
Spanned Gaps 0
Species Taxid 715
SSU Count 1
Submitter Huazhong Agricultural University
Taxid 754259
Total Gap Length 0
Translation Table 11
tRNA Count (total) 46
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master ADOJ00000000.1