Bacteroides xylanisolvens
Isolate HQ 5S/16S/23S 19 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Bacteroidota; c__Bacteroidia; o__Bacteroidales; f__Bacteroidaceae; g__Bacteroides; s__Bacteroides xylanisolvens
Filtered NCBI Taxonomy d__Bacteria; p__Bacteroidetes; c__Bacteroidia; o__Bacteroidales; f__Bacteroidaceae; g__Bacteroides; s__Bacteroides xylanisolvens
Unfiltered NCBI Taxonomy d__Bacteria; x__FCB group; x__Bacteroidetes/Chlorobi group; p__Bacteroidetes; c__Bacteroidia; o__Bacteroidales; f__Bacteroidaceae; g__Bacteroides; s__Bacteroides xylanisolvens; x__Bacteroides xylanisolvens SD CC 1b
NCBI Strain Identifiers SD CC 1b
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000210075.1)
Genome Characteristics
CheckM Completeness 99.46%
CheckM Contamination 0.0%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 1
23S Count 2
tRNA Count 19
Contig Count 236
N50 Contigs 60,820 bp
Longest Contig 213,454 bp
Scaffold Count 236
N50 Scaffolds 60,820 bp
Longest Scaffold 213,454 bp
Genome Size 6,059,812 bp
Protein Count 5,026
Coding Density 90.01%
GC Percentage 41.98%
Ambiguous Bases 6
GTDB representative GCA_000210075.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM17821v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN00007489
Country None
Date 2010-04-08
Genbank Assembly Accession GCA_000178215.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source biological product [ENVO:02000043]
Latitude Longitude None
Molecule Count N/A
CDS Count 4,960
Refseq Category na
Seq Rel Date 2010/04/08
Spanned Gaps 0
Species Taxid 371601
SSU Count 1
Submitter J. Craig Venter Institute
Taxid 702447
Total Gap Length 0
Translation Table 11
tRNA Count (total) 50
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master ADKP00000000.1