Ruminococcus_D albus_C
Isolate HQ 5S/16S/23S 19 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes_A; c__Clostridia; o__Oscillospirales; f__Ruminococcaceae; g__Ruminococcus_D; s__Ruminococcus_D albus_C
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Clostridia; o__Clostridiales; f__Ruminococcaceae; g__Ruminococcus; s__Ruminococcus albus
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Clostridia; o__Clostridiales; f__Ruminococcaceae; g__Ruminococcus; s__Ruminococcus albus; x__Ruminococcus albus 8
NCBI Strain Identifiers 8
GTDB Type Material Designation not type material
GTDB Representative of Species True (1 genome in species cluster)
Genome Characteristics
CheckM Completeness 99.32%
CheckM Contamination 0.0%
CheckM Strain Heterogeneity 0.0
5S Count 3
16S Count 2
23S Count 1
tRNA Count 19
Contig Count 136
N50 Contigs 109,105 bp
Longest Contig 269,882 bp
Scaffold Count 136
N50 Scaffolds 109,105 bp
Longest Scaffold 269,882 bp
Genome Size 4,052,160 bp
Protein Count 3,666
Coding Density 85.17%
GC Percentage 46.60%
Ambiguous Bases N/A
GTDB representative of species True
NCBI Metadata
Assembly Level Contig
Assembly Name ASM17815v2
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02436640
Country None
Date 2011-02-25
Genbank Assembly Accession GCA_000178155.2
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source rumen
Latitude Longitude None
Molecule Count N/A
CDS Count 3,684
Refseq Category na
Seq Rel Date 2011/02/25
Spanned Gaps 0
Species Taxid 1264
SSU Count 2
Submitter TIGR
Taxid 246199
Total Gap Length 0
Translation Table 11
tRNA Count (total) 54
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master ADKM00000000.2