Arthrospira maxima_A
Isolate HQ 5S/16S/23S 18 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Cyanobacteria; c__Cyanobacteriia; o__Cyanobacteriales; f__Phormidiaceae; g__Arthrospira; s__Arthrospira maxima_A
Filtered NCBI Taxonomy d__Bacteria; p__Cyanobacteria; c__; o__Oscillatoriales; f__Microcoleaceae; g__Limnospira; s__Limnospira indica
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; x__Cyanobacteria/Melainabacteria group; p__Cyanobacteria; x__Oscillatoriophycideae; o__Oscillatoriales; f__Microcoleaceae; g__Limnospira; s__Limnospira indica; x__Limnospira indica PCC 8005
NCBI Strain Identifiers PCC 8005
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000173555.1)
Genome Characteristics
CheckM Completeness 99.93%
CheckM Contamination 4.78%
CheckM Strain Heterogeneity 90.91
5S Count 2
16S Count 1
23S Count 2
tRNA Count 18
Contig Count 698
N50 Contigs 55,028 bp
Longest Contig 172,295 bp
Scaffold Count 692
N50 Scaffolds 55,028 bp
Longest Scaffold 172,295 bp
Genome Size 6,166,364 bp
Protein Count 5,824
Coding Density 82.55%
GC Percentage 44.63%
Ambiguous Bases 47
GTDB representative GCA_000173555.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name ASM17689v2
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMEA3138303
Country None
Date 2012-02-14
Genbank Assembly Accession GCA_000176895.2
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 6,094
Refseq Category na
Seq Rel Date 2012/02/14
Spanned Gaps 6
Species Taxid 147322
SSU Count 1
Submitter SCK-CEN, Belgian Nuclear Research Center/Genoscope
Taxid 376219
Total Gap Length 170
Translation Table 11
tRNA Count (total) 41
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master CAFN00000000.1