Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Escherichia; s__Escherichia coli
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Escherichia; s__Escherichia coli
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Escherichia; s__Escherichia coli; x__Escherichia coli H299
NCBI Strain Identifiers H299
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_003697165.2)
Genome Characteristics
CheckM Completeness 99.97%
CheckM Contamination 0.33%
CheckM Strain Heterogeneity 0.0
5S Count 7
16S Count 2
23S Count 2
tRNA Count 20
Contig Count 229
N50 Contigs 121,068 bp
Longest Contig 646,899 bp
Scaffold Count 113
N50 Scaffolds 664,637 bp
Longest Scaffold 733,129 bp
Genome Size 5,317,843 bp
Protein Count 5,057
Coding Density 85.57%
GC Percentage 50.75%
Ambiguous Bases 2
GTDB representative GCA_003697165.2
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name ASM17669v2
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02595374
Country None
Date 2011-04-29
Genbank Assembly Accession GCA_000176695.2
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 5,611
Refseq Category na
Seq Rel Date 2011/04/29
Spanned Gaps 116
Species Taxid 562
SSU Count 4
Submitter Broad Institute
Taxid 656393
Total Gap Length 68937
Translation Table 11
tRNA Count (total) 86
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master ADBC00000000.1