Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Vibrionaceae; g__Vibrio; s__Vibrio metoecus
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Vibrionales; f__Vibrionaceae; g__Vibrio; s__Vibrio metoecus
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Vibrionales; f__Vibrionaceae; g__Vibrio; s__Vibrio metoecus
NCBI Strain Identifiers RC341
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000696385.1)
Genome Characteristics
CheckM Completeness 99.21%
CheckM Contamination 0.1%
CheckM Strain Heterogeneity 0.0
5S Count 7
16S Count 7
23S Count 8
tRNA Count 19
Contig Count 28
N50 Contigs 300,667 bp
Longest Contig 683,744 bp
Scaffold Count 28
N50 Scaffolds 300,667 bp
Longest Scaffold 683,744 bp
Genome Size 4,008,705 bp
Protein Count 3,651
Coding Density 87.71%
GC Percentage 46.91%
Ambiguous Bases N/A
GTDB representative GCA_000696385.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM17621v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02393823
Country USA: Chesapeake Bay; MD
Date 2009-10-08
Genbank Assembly Accession GCA_000176215.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 3,717
Refseq Category na
Seq Rel Date 2009/10/08
Spanned Gaps 0
Species Taxid 1481663
SSU Count 6
Submitter Los Alamos National Laboratory (LANL), National Microbial Pathogen Data Resource (NMPDR)
Taxid 1481663
Total Gap Length 0
Translation Table 11
tRNA Count (total) 68
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master ACZT00000000.1