Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Sphingomonadales; f__Sphingomonadaceae; g__Zymomonas; s__Zymomonas mobilis
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Sphingomonadales; f__Sphingomonadaceae; g__Zymomonas; s__Zymomonas mobilis
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Sphingomonadales; f__Sphingomonadaceae; g__Zymomonas; s__Zymomonas mobilis; sb__Zymomonas mobilis subsp. mobilis; x__Zymomonas mobilis subsp. mobilis ATCC 10988
NCBI Strain Identifiers ATCC 10988
GTDB Type Material Designation type strain of species
GTDB Representative of Species True (23 genomes in species cluster)
Genome Characteristics
CheckM Completeness 100.0%
CheckM Contamination 0.45%
CheckM Strain Heterogeneity 0.0
5S Count 2
16S Count 2
23S Count 2
tRNA Count 20
Contig Count 7
N50 Contigs 2,021,773 bp
Longest Contig 2,021,773 bp
Scaffold Count 7
N50 Scaffolds 2,021,773 bp
Longest Scaffold 2,021,773 bp
Genome Size 2,143,461 bp
Protein Count 1,869
Coding Density 85.44%
GC Percentage 46.06%
Ambiguous Bases N/A
GTDB representative of species True
NCBI Metadata
Assembly Level Complete Genome
Assembly Name ASM17525v2
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02232066
Country Mexico
Date 2011-6-13
Genbank Assembly Accession GCA_000175255.2
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source fermenting agave juice
Latitude Longitude None
Molecule Count 7
CDS Count 1,906
Refseq Category representative genome
Seq Rel Date 2011/06/13
Spanned Gaps 0
Species Taxid 542
SSU Count 2
Submitter US DOE Joint Genome Institute (JGI-PGF)
Taxid 555217
Total Gap Length 0
Translation Table 11
tRNA Count (total) 48
Type Material assembly from type material
Unspanned Gaps 0
Version Status latest
WGS Master None