Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Xanthomonadales; f__Xanthomonadaceae; g__Xanthomonas; s__Xanthomonas citri
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Xanthomonadales; f__Xanthomonadaceae; g__Xanthomonas; s__Xanthomonas citri
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Xanthomonadales; f__Xanthomonadaceae; g__Xanthomonas; x__Xanthomonas citri group; s__Xanthomonas citri; x__Xanthomonas citri pv. aurantifolii; x__Xanthomonas citri pv. aurantifolii str. ICPB 10535
NCBI Strain Identifiers ICPB 10535
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_002019225.1)
Genome Characteristics
CheckM Completeness 99.24%
CheckM Contamination 0.48%
CheckM Strain Heterogeneity 50.0
5S Count 2
16S Count 2
23S Count 1
tRNA Count 18
Contig Count 352
N50 Contigs 29,390 bp
Longest Contig 116,800 bp
Scaffold Count 351
N50 Scaffolds 29,390 bp
Longest Scaffold 116,800 bp
Genome Size 5,012,633 bp
Protein Count 4,433
Coding Density 85.69%
GC Percentage 64.81%
Ambiguous Bases 234
GTDB representative GCA_002019225.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name ASM17515v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02472096
Country None
Date 2010-03-30
Genbank Assembly Accession GCA_000175155.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 4,581
Refseq Category na
Seq Rel Date 2010/03/30
Spanned Gaps 1
Species Taxid 346
SSU Count 2
Submitter Sao Paulo State (Brazil) Xanthomonas Consortium
Taxid 427082
Total Gap Length 10
Translation Table 11
tRNA Count (total) 53
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master ACPY00000000.1