Porphyromonas uenonis_A
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Bacteroidota; c__Bacteroidia; o__Bacteroidales; f__Porphyromonadaceae; g__Porphyromonas; s__Porphyromonas uenonis_A
Filtered NCBI Taxonomy d__Bacteria; p__Bacteroidetes; c__Bacteroidia; o__Bacteroidales; f__Porphyromonadaceae; g__Porphyromonas; s__Porphyromonas uenonis
Unfiltered NCBI Taxonomy d__Bacteria; x__FCB group; x__Bacteroidetes/Chlorobi group; p__Bacteroidetes; c__Bacteroidia; o__Bacteroidales; f__Porphyromonadaceae; g__Porphyromonas; s__Porphyromonas uenonis; x__Porphyromonas uenonis 60-3
NCBI Strain Identifiers 60-3
GTDB Type Material Designation not type material
GTDB Representative of Species True (1 genome in species cluster)
Genome Characteristics
CheckM Completeness 99.92%
CheckM Contamination 2.36%
CheckM Strain Heterogeneity 94.44
5S Count 3
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 250
N50 Contigs 65,101 bp
Longest Contig 152,717 bp
Scaffold Count 250
N50 Scaffolds 65,101 bp
Longest Scaffold 152,717 bp
Genome Size 2,242,885 bp
Protein Count 2,061
Coding Density 86.57%
GC Percentage 52.46%
Ambiguous Bases 4
GTDB representative of species True
NCBI Metadata
Assembly Level Contig
Assembly Name ASM17477v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN00002220
Country None
Date 2009-04-29
Genbank Assembly Accession GCA_000174775.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source biological product [ENVO:02000043]
Latitude Longitude None
Molecule Count N/A
CDS Count 1,964
Refseq Category na
Seq Rel Date 2009/04/29
Spanned Gaps 0
Species Taxid 281920
SSU Count 1
Submitter J. Craig Venter Institute
Taxid 596327
Total Gap Length 0
Translation Table 11
tRNA Count (total) 45
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master ACLR00000000.1