Dethiobacter alkaliphilus
Isolate HQ 5S/16S/23S 19 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes_D; c__Dethiobacteria; o__Dethiobacterales; f__Dethiobacteraceae; g__Dethiobacter; s__Dethiobacter alkaliphilus
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Clostridia; o__Clostridiales; f__Syntrophomonadaceae; g__Dethiobacter; s__Dethiobacter alkaliphilus
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Clostridia; o__Clostridiales; f__Syntrophomonadaceae; g__Dethiobacter; s__Dethiobacter alkaliphilus; x__Dethiobacter alkaliphilus AHT 1
NCBI Strain Identifiers AHT 1
GTDB Type Material Designation type strain of species
GTDB Representative of Species True (1 genome in species cluster)
Genome Characteristics
CheckM Completeness 95.76%
CheckM Contamination 1.13%
CheckM Strain Heterogeneity 0.0
5S Count 5
16S Count 4
23S Count 7
tRNA Count 19
Contig Count 34
N50 Contigs 191,499 bp
Longest Contig 428,681 bp
Scaffold Count 34
N50 Scaffolds 191,499 bp
Longest Scaffold 428,681 bp
Genome Size 3,116,746 bp
Protein Count 3,158
Coding Density 88.73%
GC Percentage 48.46%
Ambiguous Bases 1
GTDB representative of species True
NCBI Metadata
Assembly Level Contig
Assembly Name ASM17441v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02441789
Country None
Date 2009-03-17
Genbank Assembly Accession GCA_000174415.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 3,097
Refseq Category representative genome
Seq Rel Date 2009/03/17
Spanned Gaps 0
Species Taxid 427926
SSU Count 4
Submitter US DOE Joint Genome Institute (JGI-PGF)
Taxid 555088
Total Gap Length 0
Translation Table 11
tRNA Count (total) 43
Type Material assembly from type material
Unspanned Gaps 0
Version Status latest
WGS Master ACJM00000000.1