Pseudogulbenkiania ferrooxidans_A
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Burkholderiales; f__Chromobacteriaceae; g__Pseudogulbenkiania; s__Pseudogulbenkiania ferrooxidans_A
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Betaproteobacteria; o__Neisseriales; f__Chromobacteriaceae; g__Pseudogulbenkiania; s__Pseudogulbenkiania ferrooxidans
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Betaproteobacteria; o__Neisseriales; f__Chromobacteriaceae; g__Pseudogulbenkiania; s__Pseudogulbenkiania ferrooxidans; x__Pseudogulbenkiania ferrooxidans 2002
NCBI Strain Identifiers 2002
GTDB Type Material Designation not type material
GTDB Representative of Species True (2 genomes in species cluster)
Genome Characteristics
CheckM Completeness 99.53%
CheckM Contamination 0.85%
CheckM Strain Heterogeneity 0.0
5S Count 7
16S Count 1
23S Count 4
tRNA Count 20
Contig Count 23
N50 Contigs 293,246 bp
Longest Contig 558,909 bp
Scaffold Count 20
N50 Scaffolds 395,779 bp
Longest Scaffold 558,909 bp
Genome Size 4,228,787 bp
Protein Count 3,917
Coding Density 88.14%
GC Percentage 64.66%
Ambiguous Bases 14
GTDB representative of species True
NCBI Metadata
Assembly Level Scaffold
Assembly Name ASM17435v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN00001906
Country None
Date 2009-03-06
Genbank Assembly Accession GCA_000174355.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 3,893
Refseq Category na
Seq Rel Date 2009/03/06
Spanned Gaps 3
Species Taxid 549169
SSU Count 1
Submitter US DOE Joint Genome Institute (JGI-PGF)
Taxid 279714
Total Gap Length 41
Translation Table 11
tRNA Count (total) 78
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master ACIS00000000.1