Actinobacillus_A porcitonsillarum
Isolate HQ 16S/23S 17 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Pasteurellaceae; g__Actinobacillus_A; s__Actinobacillus_A porcitonsillarum
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Pasteurellales; f__Pasteurellaceae; g__Actinobacillus; s__Actinobacillus minor
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Pasteurellales; f__Pasteurellaceae; g__Actinobacillus; s__Actinobacillus minor; x__Actinobacillus minor 202
NCBI Strain Identifiers 202
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_003101015.1)
Genome Characteristics
CheckM Completeness 99.86%
CheckM Contamination 0.8%
CheckM Strain Heterogeneity 50.0
5S Count 0
16S Count 1
23S Count 1
tRNA Count 17
Contig Count 154
N50 Contigs 32,054 bp
Longest Contig 125,715 bp
Scaffold Count 154
N50 Scaffolds 32,054 bp
Longest Scaffold 125,715 bp
Genome Size 2,127,148 bp
Protein Count 2,049
Coding Density 89.86%
GC Percentage 39.32%
Ambiguous Bases 298
GTDB representative GCA_003101015.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM17415v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02470283
Country None
Date 2009-02-09
Genbank Assembly Accession GCA_000174155.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 2,034
Refseq Category na
Seq Rel Date 2009/02/09
Spanned Gaps 0
Species Taxid 51047
SSU Count 1
Submitter McGill University
Taxid 591023
Total Gap Length 0
Translation Table 11
tRNA Count (total) 27
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master ACFT00000000.1