Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Actinobacteriota; c__Actinomycetia; o__Mycobacteriales; f__Mycobacteriaceae; g__Mycobacterium; s__Mycobacterium avium
Filtered NCBI Taxonomy d__Bacteria; p__Actinobacteria; c__Actinobacteria; o__Corynebacteriales; f__Mycobacteriaceae; g__Mycobacterium; s__Mycobacterium avium
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Actinobacteria; c__Actinobacteria; o__Corynebacteriales; f__Mycobacteriaceae; g__Mycobacterium; x__Mycobacterium avium complex (MAC); s__Mycobacterium avium; sb__Mycobacterium avium subsp. avium; x__Mycobacterium avium subsp. avium ATCC 25291
NCBI Strain Identifiers ATCC 25291
GTDB Type Material Designation type strain of species
GTDB Representative of Species True (197 genomes in species cluster)
Genome Characteristics
CheckM Completeness 97.99%
CheckM Contamination 0.26%
CheckM Strain Heterogeneity 0.0
5S Count 0
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 258
N50 Contigs 45,689 bp
Longest Contig 232,624 bp
Scaffold Count 258
N50 Scaffolds 45,689 bp
Longest Scaffold 232,624 bp
Genome Size 4,857,995 bp
Protein Count 4,733
Coding Density 91.50%
GC Percentage 69.24%
Ambiguous Bases 14
GTDB representative of species True
NCBI Metadata
Assembly Level Contig
Assembly Name ASM17403v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02470543
Country None
Date 2009-01-27
Genbank Assembly Accession GCA_000174035.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 4,720
Refseq Category na
Seq Rel Date 2009/01/27
Spanned Gaps 0
Species Taxid 1764
SSU Count 1
Submitter McGill University
Taxid 553481
Total Gap Length 0
Translation Table 11
tRNA Count (total) 46
Type Material assembly from type material
Unspanned Gaps 0
Version Status latest
WGS Master ACFI00000000.1