Streptococcus pneumoniae
Isolate HQ 5S/16S/23S 19 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Streptococcaceae; g__Streptococcus; s__Streptococcus pneumoniae
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Streptococcaceae; g__Streptococcus; s__Streptococcus pneumoniae
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Streptococcaceae; g__Streptococcus; s__Streptococcus pneumoniae; x__Streptococcus pneumoniae SP-BS293
NCBI Strain Identifiers SP-BS293
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_001457635.1)
Genome Characteristics
CheckM Completeness 99.77%
CheckM Contamination 0.21%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 1
23S Count 1
tRNA Count 19
Contig Count 30
N50 Contigs 179,072 bp
Longest Contig 275,617 bp
Scaffold Count 30
N50 Scaffolds 179,072 bp
Longest Scaffold 275,617 bp
Genome Size 2,065,452 bp
Protein Count 2,081
Coding Density 86.31%
GC Percentage 39.63%
Ambiguous Bases N/A
GTDB representative GCA_001457635.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM17329v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02393763
Country None
Date 2010-08-12
Genbank Assembly Accession GCA_000173295.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 2,193
Refseq Category na
Seq Rel Date 2010/08/12
Spanned Gaps 0
Species Taxid 1313
SSU Count 1
Submitter Center for Genomic Sciences, Allegheny-Singer Research Institute
Taxid 497963
Total Gap Length 0
Translation Table 11
tRNA Count (total) 35
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master ABWU00000000.1