MS024-2A sp000173095
Isolate HQ 5S/16S/23S 19 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Bacteroidota; c__Bacteroidia; o__Flavobacteriales; f__Flavobacteriaceae; g__MS024-2A; s__MS024-2A sp000173095
Filtered NCBI Taxonomy d__Bacteria; p__Bacteroidetes; c__Flavobacteriia; o__; f__; g__; s__
Unfiltered NCBI Taxonomy d__Bacteria; x__FCB group; x__Bacteroidetes/Chlorobi group; p__Bacteroidetes; c__Flavobacteriia; x__unclassified Flavobacteriia; s__Flavobacteria bacterium MS024-2A
NCBI Strain Identifiers MS024-2A
GTDB Type Material Designation not type material
GTDB Representative of Species True (3 genomes in species cluster)
Genome Characteristics
CheckM Completeness 91.18%
CheckM Contamination 0.0%
CheckM Strain Heterogeneity 0.0
5S Count 2
16S Count 2
23S Count 2
tRNA Count 19
Contig Count 17
N50 Contigs 371,257 bp
Longest Contig 684,032 bp
Scaffold Count 17
N50 Scaffolds 371,257 bp
Longest Scaffold 684,032 bp
Genome Size 1,905,484 bp
Protein Count 1,764
Coding Density 93.47%
GC Percentage 35.71%
Ambiguous Bases 1
GTDB representative of species True
NCBI Metadata
Assembly Level Contig
Assembly Name ASM17309v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02441803
Country USA: Maine
Date 2009-03-16
Genbank Assembly Accession GCA_000173095.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source Boothbay harbor; 1m depth
Latitude Longitude 43.83352 N 69.63347 W
Molecule Count N/A
CDS Count 1,731
Refseq Category na
Seq Rel Date 2009/03/16
Spanned Gaps 0
Species Taxid 487796
SSU Count 2
Submitter US DOE Joint Genome Institute (JGI-PGF)
Taxid 487796
Total Gap Length 0
Translation Table 11
tRNA Count (total) 33
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master ABVV00000000.1