Enterococcus_B faecium
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Enterococcaceae; g__Enterococcus_B; s__Enterococcus_B faecium
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Enterococcaceae; g__Enterococcus; s__Enterococcus faecium
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Enterococcaceae; g__Enterococcus; s__Enterococcus faecium; x__Enterococcus faecium E1162
NCBI Strain Identifiers E1162
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_001544255.1)
Genome Characteristics
CheckM Completeness 99.63%
CheckM Contamination 0.0%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 139
N50 Contigs 50,721 bp
Longest Contig 153,370 bp
Scaffold Count 139
N50 Scaffolds 50,721 bp
Longest Scaffold 153,370 bp
Genome Size 2,711,396 bp
Protein Count 2,608
Coding Density 85.94%
GC Percentage 37.96%
Ambiguous Bases N/A
GTDB representative GCA_001544255.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM17267v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02471503
Country France
Date 2010-03-26
Genbank Assembly Accession GCA_000172675.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source bloodstream infection of a hospitalized patient
Latitude Longitude None
Molecule Count N/A
CDS Count 2,739
Refseq Category na
Seq Rel Date 2010/03/26
Spanned Gaps 0
Species Taxid 1352
SSU Count 1
Submitter Dept. of Medical Microbiology, University Medical Center Utrecht
Taxid 535206
Total Gap Length 0
Translation Table 11
tRNA Count (total) 57
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master ABQJ00000000.1