Clostridium_P perfringens
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes_A; c__Clostridia; o__Clostridiales; f__Clostridiaceae; g__Clostridium_P; s__Clostridium_P perfringens
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Clostridia; o__Clostridiales; f__Clostridiaceae; g__Clostridium; s__Clostridium perfringens
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Clostridia; o__Clostridiales; f__Clostridiaceae; g__Clostridium; s__Clostridium perfringens; x__Clostridium perfringens CPE; x__Clostridium perfringens CPE str. F4969
NCBI Strain Identifiers F4969
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000013285.1)
Genome Characteristics
CheckM Completeness 99.04%
CheckM Contamination 0.0%
CheckM Strain Heterogeneity 0.0
5S Count 13
16S Count 20
23S Count 19
tRNA Count 20
Contig Count 74
N50 Contigs 96,499 bp
Longest Contig 365,849 bp
Scaffold Count 74
N50 Scaffolds 96,499 bp
Longest Scaffold 365,849 bp
Genome Size 3,510,272 bp
Protein Count 3,127
Coding Density 82.26%
GC Percentage 28.57%
Ambiguous Bases N/A
GTDB representative GCA_000013285.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM17119v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02436168
Country None
Date 2007-07-11
Genbank Assembly Accession GCA_000171195.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 3,055
Refseq Category na
Seq Rel Date 2007/07/11
Spanned Gaps 0
Species Taxid 1502
SSU Count 21
Submitter J. Craig Venter Institute
Taxid 451756
Total Gap Length 0
Translation Table 11
tRNA Count (total) 92
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master ABDX00000000.1