Clostridium_F botulinum
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes_A; c__Clostridia; o__Clostridiales; f__Clostridiaceae; g__Clostridium_F; s__Clostridium_F botulinum
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Clostridia; o__Clostridiales; f__Clostridiaceae; g__Clostridium; s__Clostridium botulinum
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Clostridia; o__Clostridiales; f__Clostridiaceae; g__Clostridium; s__Clostridium botulinum; x__Clostridium botulinum Bf
NCBI Strain Identifiers Bf
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_001276985.1)
Genome Characteristics
CheckM Completeness 99.31%
CheckM Contamination 0.05%
CheckM Strain Heterogeneity 100.0
5S Count 12
16S Count 19
23S Count 22
tRNA Count 20
Contig Count 70
N50 Contigs 170,315 bp
Longest Contig 327,805 bp
Scaffold Count 70
N50 Scaffolds 170,315 bp
Longest Scaffold 327,805 bp
Genome Size 4,217,754 bp
Protein Count 3,980
Coding Density 80.37%
GC Percentage 28.23%
Ambiguous Bases N/A
GTDB representative GCA_001276985.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM17107v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02436292
Country None
Date 2007-07-11
Genbank Assembly Accession GCA_000171075.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source infant botulism case
Latitude Longitude None
Molecule Count N/A
CDS Count 4,056
Refseq Category na
Seq Rel Date 2007/07/11
Spanned Gaps 0
Species Taxid 1491
SSU Count 19
Submitter J. Craig Venter Institute
Taxid 445336
Total Gap Length 0
Translation Table 11
tRNA Count (total) 81
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master ABDP00000000.1