Listeria monocytogenes_B
Isolate HQ 5S/16S/23S 15 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Listeriaceae; g__Listeria; s__Listeria monocytogenes_B
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Bacillales; f__Listeriaceae; g__Listeria; s__Listeria monocytogenes
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Bacilli; o__Bacillales; f__Listeriaceae; g__Listeria; s__Listeria monocytogenes; x__Listeria monocytogenes FSL J1-175
NCBI Strain Identifiers FSL J1-175
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000307025.1)
Genome Characteristics
CheckM Completeness 98.22%
CheckM Contamination 0.82%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 1
23S Count 1
tRNA Count 15
Contig Count 457
N50 Contigs 9,543 bp
Longest Contig 34,971 bp
Scaffold Count 457
N50 Scaffolds 9,543 bp
Longest Scaffold 34,971 bp
Genome Size 2,866,484 bp
Protein Count 3,219
Coding Density 89.70%
GC Percentage 37.87%
Ambiguous Bases 69
GTDB representative GCA_000307025.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM16841v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02415200
Country None
Date 2008-09-03
Genbank Assembly Accession GCA_000168415.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 3,195
Refseq Category na
Seq Rel Date 2008/09/03
Spanned Gaps 0
Species Taxid 1639
SSU Count 1
Submitter Broad Institute
Taxid 393118
Total Gap Length 0
Translation Table 11
tRNA Count (total) 28
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master AARK00000000.2