Escherichia flexneri
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Escherichia; s__Escherichia flexneri
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Escherichia; s__Escherichia coli
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Escherichia; s__Escherichia coli; x__Escherichia coli TW10722
NCBI Strain Identifiers TW10722
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_002950215.1)
Genome Characteristics
CheckM Completeness 99.29%
CheckM Contamination 3.35%
CheckM Strain Heterogeneity 71.05
5S Count 8
16S Count 11
23S Count 13
tRNA Count 20
Contig Count 405
N50 Contigs 135,060 bp
Longest Contig 433,411 bp
Scaffold Count 405
N50 Scaffolds 135,060 bp
Longest Scaffold 433,411 bp
Genome Size 5,689,893 bp
Protein Count 5,843
Coding Density 86.89%
GC Percentage 50.54%
Ambiguous Bases 95
GTDB representative GCA_002950215.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM16655v2
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02435971
Country None
Date 2010-11-15
Genbank Assembly Accession GCA_000166555.2
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 6,293
Refseq Category na
Seq Rel Date 2010/11/15
Spanned Gaps 0
Species Taxid 562
SSU Count 11
Submitter Institute for Genome Sciences
Taxid 913090
Total Gap Length 0
Translation Table 11
tRNA Count (total) 102
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master AELB00000000.1