Leadbetterella byssophila
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Bacteroidota; c__Bacteroidia; o__Cytophagales; f__Spirosomaceae; g__Leadbetterella; s__Leadbetterella byssophila
Filtered NCBI Taxonomy d__Bacteria; p__Bacteroidetes; c__Cytophagia; o__Cytophagales; f__Cytophagaceae; g__Leadbetterella; s__Leadbetterella byssophila
Unfiltered NCBI Taxonomy d__Bacteria; x__FCB group; x__Bacteroidetes/Chlorobi group; p__Bacteroidetes; c__Cytophagia; o__Cytophagales; f__Cytophagaceae; g__Leadbetterella; s__Leadbetterella byssophila; x__Leadbetterella byssophila DSM 17132
NCBI Strain Identifiers DSM 17132
GTDB Type Material Designation type strain of species
GTDB Representative of Species True (1 genome in species cluster)
Genome Characteristics
CheckM Completeness 98.96%
CheckM Contamination 0.3%
CheckM Strain Heterogeneity 0.0
5S Count 3
16S Count 3
23S Count 3
tRNA Count 20
Contig Count 1
N50 Contigs 4,059,653 bp
Longest Contig 4,059,653 bp
Scaffold Count 1
N50 Scaffolds 4,059,653 bp
Longest Scaffold 4,059,653 bp
Genome Size 4,059,653 bp
Protein Count 3,655
Coding Density 91.32%
GC Percentage 40.41%
Ambiguous Bases N/A
GTDB representative of species True
NCBI Metadata
Assembly Level Complete Genome
Assembly Name ASM16639v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN00191237
Country South Korea
Date 2010-11-12
Genbank Assembly Accession GCA_000166395.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source cotton waste composts used for mushroom cultivation
Latitude Longitude None
Molecule Count 1
CDS Count 3,582
Refseq Category representative genome
Seq Rel Date 2010/11/12
Spanned Gaps 0
Species Taxid 316068
SSU Count 3
Submitter US DOE Joint Genome Institute (JGI-PGF)
Taxid 649349
Total Gap Length 0
Translation Table 11
tRNA Count (total) 41
Type Material assembly from type material
Unspanned Gaps 0
Version Status latest
WGS Master None