Faecalibacterium prausnitzii_D
Isolate HQ 16S/23S 19 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes_A; c__Clostridia; o__Oscillospirales; f__Ruminococcaceae; g__Faecalibacterium; s__Faecalibacterium prausnitzii_D
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Clostridia; o__Clostridiales; f__Ruminococcaceae; g__Faecalibacterium; s__Faecalibacterium prausnitzii
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Clostridia; o__Clostridiales; f__Ruminococcaceae; g__Faecalibacterium; s__Faecalibacterium prausnitzii; x__Faecalibacterium cf. prausnitzii KLE1255
NCBI Strain Identifiers KLE1255
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_002549755.1)
Genome Characteristics
CheckM Completeness 97.96%
CheckM Contamination 0.0%
CheckM Strain Heterogeneity 0.0
5S Count 0
16S Count 1
23S Count 3
tRNA Count 19
Contig Count 249
N50 Contigs 28,372 bp
Longest Contig 135,973 bp
Scaffold Count 139
N50 Scaffolds 135,867 bp
Longest Scaffold 279,289 bp
Genome Size 2,928,734 bp
Protein Count 2,849
Coding Density 86.67%
GC Percentage 56.31%
Ambiguous Bases N/A
GTDB representative GCA_002549755.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name ASM16603v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN00189147
Country None
Date 2010-11-5
Genbank Assembly Accession GCA_000166035.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source biological product [ENVO:02000043]
Latitude Longitude None
Molecule Count N/A
CDS Count 2,870
Refseq Category na
Seq Rel Date 2010/11/05
Spanned Gaps 110
Species Taxid 853
SSU Count 0
Submitter Washington University Genome Center
Taxid 748224
Total Gap Length 2173
Translation Table 11
tRNA Count (total) 53
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master AECU00000000.1