Borreliella afzelii
Isolate HQ 5S/16S/23S 19 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Spirochaetota; c__Spirochaetia; o__Borreliales; f__Borreliaceae; g__Borreliella; s__Borreliella afzelii
Filtered NCBI Taxonomy d__Bacteria; p__Spirochaetes; c__Spirochaetia; o__Spirochaetales; f__Borreliaceae; g__Borreliella; s__Borreliella afzelii
Unfiltered NCBI Taxonomy d__Bacteria; p__Spirochaetes; c__Spirochaetia; o__Spirochaetales; f__Borreliaceae; g__Borreliella; s__Borreliella afzelii; x__Borreliella afzelii PKo
NCBI Strain Identifiers PKo
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_001900865.1)
Genome Characteristics
CheckM Completeness 99.19%
CheckM Contamination 0.0%
CheckM Strain Heterogeneity 0.0
5S Count 2
16S Count 2
23S Count 2
tRNA Count 19
Contig Count 12
N50 Contigs 905,394 bp
Longest Contig 905,394 bp
Scaffold Count 12
N50 Scaffolds 905,394 bp
Longest Scaffold 905,394 bp
Genome Size 1,232,503 bp
Protein Count 1,171
Coding Density 86.57%
GC Percentage 27.70%
Ambiguous Bases N/A
GTDB representative GCA_001900865.1
GTDB representative of species False
NCBI Metadata
Assembly Level Chromosome
Assembly Name ASM16559v2
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02641500
Country None
Date 2006-07-31
Genbank Assembly Accession GCA_000165595.2
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count 10
CDS Count 1,181
Refseq Category na
Seq Rel Date 2006/07/31
Spanned Gaps 0
Species Taxid 29518
SSU Count 2
Submitter Fritz Lipmann Institute (former Institute of Molecular Biotechnology, IMB)
Taxid 390236
Total Gap Length 0
Translation Table 11
tRNA Count (total) 32
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master None