Bifidobacterium bifidum
Isolate HQ 16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Actinobacteriota; c__Actinomycetia; o__Actinomycetales; f__Bifidobacteriaceae; g__Bifidobacterium; s__Bifidobacterium bifidum
Filtered NCBI Taxonomy d__Bacteria; p__Actinobacteria; c__Actinobacteria; o__Bifidobacteriales; f__Bifidobacteriaceae; g__Bifidobacterium; s__Bifidobacterium bifidum
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Actinobacteria; c__Actinobacteria; o__Bifidobacteriales; f__Bifidobacteriaceae; g__Bifidobacterium; s__Bifidobacterium bifidum; x__Bifidobacterium bifidum S17
NCBI Strain Identifiers S17
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_001025135.1)
Genome Characteristics
CheckM Completeness 99.54%
CheckM Contamination 0.0%
CheckM Strain Heterogeneity 0.0
5S Count 0
16S Count 3
23S Count 3
tRNA Count 20
Contig Count 1
N50 Contigs 2,186,882 bp
Longest Contig 2,186,882 bp
Scaffold Count 1
N50 Scaffolds 2,186,882 bp
Longest Scaffold 2,186,882 bp
Genome Size 2,186,882 bp
Protein Count 1,787
Coding Density 85.26%
GC Percentage 62.76%
Ambiguous Bases N/A
GTDB representative GCA_001025135.1
GTDB representative of species False
NCBI Metadata
Assembly Level Complete Genome
Assembly Name ASM16496v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02603395
Country None
Date 2010-10-19
Genbank Assembly Accession GCA_000164965.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count 1
CDS Count 1,800
Refseq Category na
Seq Rel Date 2010/10/19
Spanned Gaps 0
Species Taxid 1681
SSU Count 3
Submitter Institute of Microbiology and Biotechnology, University of Ulm
Taxid 883062
Total Gap Length 0
Translation Table 11
tRNA Count (total) 53
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master None