Staphylococcus epidermidis
Isolate HQ 5S/16S/23S 19 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Staphylococcales; f__Staphylococcaceae; g__Staphylococcus; s__Staphylococcus epidermidis
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Bacillales; f__Staphylococcaceae; g__Staphylococcus; s__Staphylococcus epidermidis
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Bacilli; o__Bacillales; f__Staphylococcaceae; g__Staphylococcus; s__Staphylococcus epidermidis; x__Staphylococcus epidermidis M23864:W2(grey)
NCBI Strain Identifiers M23864:W2(grey)
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_006742205.1)
Genome Characteristics
CheckM Completeness 99.81%
CheckM Contamination 0.0%
CheckM Strain Heterogeneity 0.0
5S Count 2
16S Count 1
23S Count 1
tRNA Count 19
Contig Count 63
N50 Contigs 92,830 bp
Longest Contig 263,768 bp
Scaffold Count 13
N50 Scaffolds 1,665,689 bp
Longest Scaffold 1,665,689 bp
Genome Size 2,523,347 bp
Protein Count 2,327
Coding Density 82.53%
GC Percentage 32.09%
Ambiguous Bases N/A
GTDB representative GCA_006742205.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name ASM16407v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02299424
Country None
Date 2010-3-23
Genbank Assembly Accession GCA_000164075.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source biological product [ENVO:02000043]
Latitude Longitude None
Molecule Count N/A
CDS Count 2,439
Refseq Category na
Seq Rel Date 2010/03/23
Spanned Gaps 50
Species Taxid 1282
SSU Count 1
Submitter Baylor College of Medicine
Taxid 525375
Total Gap Length 38006
Translation Table 11
tRNA Count (total) 55
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master ADMU00000000.1