Fusobacterium periodonticum_B
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Fusobacteriota; c__Fusobacteriia; o__Fusobacteriales; f__Fusobacteriaceae; g__Fusobacterium; s__Fusobacterium periodonticum_B
Filtered NCBI Taxonomy d__Bacteria; p__Fusobacteria; c__Fusobacteriia; o__Fusobacteriales; f__Fusobacteriaceae; g__Fusobacterium; s__Fusobacterium periodonticum
Unfiltered NCBI Taxonomy d__Bacteria; p__Fusobacteria; c__Fusobacteriia; o__Fusobacteriales; f__Fusobacteriaceae; g__Fusobacterium; s__Fusobacterium periodonticum; x__Fusobacterium periodonticum 1_1_41FAA
NCBI Strain Identifiers 1_1_41FAA
GTDB Type Material Designation not type material
GTDB Representative of Species True (1 genome in species cluster)
Genome Characteristics
CheckM Completeness 100.0%
CheckM Contamination 0.0%
CheckM Strain Heterogeneity 0.0
5S Count 6
16S Count 2
23S Count 1
tRNA Count 20
Contig Count 80
N50 Contigs 96,412 bp
Longest Contig 338,886 bp
Scaffold Count 31
N50 Scaffolds 852,333 bp
Longest Scaffold 992,199 bp
Genome Size 2,479,455 bp
Protein Count 2,397
Coding Density 88.30%
GC Percentage 27.88%
Ambiguous Bases 4
GTDB representative of species True
NCBI Metadata
Assembly Level Scaffold
Assembly Name ASM16393v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02463706
Country None
Date 2010-4-9
Genbank Assembly Accession GCA_000163935.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source biological product [ENVO:02000043]
Latitude Longitude None
Molecule Count N/A
CDS Count 2,428
Refseq Category na
Seq Rel Date 2010/04/09
Spanned Gaps 49
Species Taxid 860
SSU Count 5
Submitter Broad Institute
Taxid 469621
Total Gap Length 24808
Translation Table 11
tRNA Count (total) 47
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master ADGG00000000.1