Pasteurella dagmatis
Isolate HQ 5S/16S/23S 18 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Pasteurellaceae; g__Pasteurella; s__Pasteurella dagmatis
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Pasteurellales; f__Pasteurellaceae; g__Pasteurella; s__Pasteurella dagmatis
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Pasteurellales; f__Pasteurellaceae; g__Pasteurella; s__Pasteurella dagmatis; x__Pasteurella dagmatis ATCC 43325
NCBI Strain Identifiers ATCC 43325
GTDB Type Material Designation type strain of species
GTDB Representative of Species False (representative is GCA_900186835.1)
Genome Characteristics
CheckM Completeness 99.55%
CheckM Contamination 0.02%
CheckM Strain Heterogeneity 0.0
5S Count 2
16S Count 1
23S Count 1
tRNA Count 18
Contig Count 28
N50 Contigs 219,540 bp
Longest Contig 308,287 bp
Scaffold Count 14
N50 Scaffolds 608,502 bp
Longest Scaffold 796,493 bp
Genome Size 2,263,252 bp
Protein Count 2,017
Coding Density 88.51%
GC Percentage 37.39%
Ambiguous Bases N/A
GTDB representative GCA_900186835.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name ASM16347v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN00120578
Country None
Date 2009-10-8
Genbank Assembly Accession GCA_000163475.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source biological product [ENVO:02000043]
Latitude Longitude None
Molecule Count N/A
CDS Count 2,012
Refseq Category na
Seq Rel Date 2009/10/08
Spanned Gaps 14
Species Taxid 754
SSU Count 1
Submitter Baylor College of Medicine
Taxid 667128
Total Gap Length 16985
Translation Table 11
tRNA Count (total) 47
Type Material assembly from type material
Unspanned Gaps 0
Version Status latest
WGS Master ACZR00000000.1