Prevotella melaninogenica
Isolate HQ 5S/16S/23S 17 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Bacteroidota; c__Bacteroidia; o__Bacteroidales; f__Bacteroidaceae; g__Prevotella; s__Prevotella melaninogenica
Filtered NCBI Taxonomy d__Bacteria; p__Bacteroidetes; c__Bacteroidia; o__Bacteroidales; f__Prevotellaceae; g__Prevotella; s__Prevotella melaninogenica
Unfiltered NCBI Taxonomy d__Bacteria; x__FCB group; x__Bacteroidetes/Chlorobi group; p__Bacteroidetes; c__Bacteroidia; o__Bacteroidales; f__Prevotellaceae; g__Prevotella; s__Prevotella melaninogenica; x__Prevotella melaninogenica D18
NCBI Strain Identifiers D18
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000144405.1)
Genome Characteristics
CheckM Completeness 98.99%
CheckM Contamination 0.0%
CheckM Strain Heterogeneity 0.0
5S Count 2
16S Count 1
23S Count 1
tRNA Count 17
Contig Count 173
N50 Contigs 38,009 bp
Longest Contig 133,804 bp
Scaffold Count 46
N50 Scaffolds 217,145 bp
Longest Scaffold 515,257 bp
Genome Size 3,292,341 bp
Protein Count 2,622
Coding Density 79.78%
GC Percentage 40.86%
Ambiguous Bases 2
GTDB representative GCA_000144405.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name ASM16303v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02463806
Country None
Date 2010-2-4
Genbank Assembly Accession GCA_000163035.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source biological product [ENVO:02000043]
Latitude Longitude None
Molecule Count N/A
CDS Count 2,551
Refseq Category na
Seq Rel Date 2010/02/04
Spanned Gaps 127
Species Taxid 28132
SSU Count 1
Submitter Broad Institute
Taxid 575612
Total Gap Length 78900
Translation Table 11
tRNA Count (total) 44
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master ACWY00000000.1