Lactobacillus jensenii_A
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Lactobacillaceae; g__Lactobacillus; s__Lactobacillus jensenii_A
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Lactobacillaceae; g__Lactobacillus; s__Lactobacillus jensenii
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Lactobacillaceae; g__Lactobacillus; s__Lactobacillus jensenii; x__Lactobacillus jensenii 27-2-CHN
NCBI Strain Identifiers 27-2-CHN
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000159335.1)
Genome Characteristics
CheckM Completeness 98.83%
CheckM Contamination 0.0%
CheckM Strain Heterogeneity 0.0
5S Count 4
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 39
N50 Contigs 88,629 bp
Longest Contig 427,980 bp
Scaffold Count 4
N50 Scaffolds 1,056,390 bp
Longest Scaffold 1,056,390 bp
Genome Size 1,639,455 bp
Protein Count 1,514
Coding Density 88.35%
GC Percentage 34.09%
Ambiguous Bases N/A
GTDB representative GCA_000159335.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name Lacto_jen_27-2-CHN_V2
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02463727
Country None
Date 2013-9-30
Genbank Assembly Accession GCA_000161895.2
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source biological product [ENVO:02000043]
Latitude Longitude None
Molecule Count N/A
CDS Count 1,533
Refseq Category na
Seq Rel Date 2013/09/30
Spanned Gaps 35
Species Taxid 109790
SSU Count 1
Submitter Broad Institute
Taxid 575606
Total Gap Length 3500
Translation Table 11
tRNA Count (total) 55
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master ACOF00000000.2