| GTDB Taxonomy | d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Lactobacillaceae; g__Lactobacillus; s__Lactobacillus iners |
|---|---|
| Filtered NCBI Taxonomy | d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Lactobacillaceae; g__Lactobacillus; s__Lactobacillus iners |
| Unfiltered NCBI Taxonomy | d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Lactobacillaceae; g__Lactobacillus; s__Lactobacillus iners; x__Lactobacillus iners DSM 13335 |
| NCBI Strain Identifiers | DSM 13335 |
| GTDB Type Material Designation | type strain of species |
| GTDB Representative of Species | True (21 genomes in species cluster) |
| CheckM Completeness | 99.41% |
|---|---|
| CheckM Contamination | 0.44% |
| CheckM Strain Heterogeneity | 0.0 |
| 5S Count | 1 |
| 16S Count | 1 |
| 23S Count | 1 |
| tRNA Count | 18 |
| Contig Count | 21 |
| N50 Contigs | 246,521 bp |
| Longest Contig | 461,521 bp |
| Scaffold Count | 12 |
| N50 Scaffolds | 246,521 bp |
| Longest Scaffold | 481,837 bp |
| Genome Size | 1,277,649 bp |
| Protein Count | 1,196 |
| Coding Density | 89.23% |
| GC Percentage | 32.51% |
| Ambiguous Bases | N/A |
| GTDB representative of species | True |
| Assembly Level | Scaffold |
|---|---|
| Assembly Name | ASM16087v1 |
| Assembly Type | n/a |
| Bioproject | PRJNA224116 |
| Biosample | SAMN00139432 |
| Country | None |
| Date | 2009-9-22 |
| Genbank Assembly Accession | GCA_000160875.1 |
| Genome Category | Isolate |
| Genome Representation | full |
| Isolate | None |
| Isolation Source | biological product [ENVO:02000043] |
| Latitude Longitude | None |
| Molecule Count | N/A |
| CDS Count | 1,195 |
| Refseq Category | representative genome |
| Seq Rel Date | 2009/09/22 |
| Spanned Gaps | 9 |
| Species Taxid | 147802 |
| SSU Count | 1 |
| Submitter | BCM |
| Taxid | 525328 |
| Total Gap Length | 8328 |
| Translation Table | 11 |
| tRNA Count (total) | 44 |
| Type Material | assembly from type material |
| Unspanned Gaps | 0 |
| Version Status | latest |
| WGS Master | ACLN00000000.1 |