Lactobacillus helveticus
Isolate HQ 16S/23S 16 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Lactobacillaceae; g__Lactobacillus; s__Lactobacillus helveticus
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Lactobacillaceae; g__Lactobacillus; s__Lactobacillus helveticus
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Lactobacillaceae; g__Lactobacillus; s__Lactobacillus helveticus; x__Lactobacillus helveticus DSM 20075 = CGMCC 1.1877
NCBI Strain Identifiers DSM 20075
GTDB Type Material Designation type strain of species
GTDB Representative of Species True (58 genomes in species cluster)
Genome Characteristics
CheckM Completeness 98.16%
CheckM Contamination 0.32%
CheckM Strain Heterogeneity 0.0
5S Count 0
16S Count 1
23S Count 1
tRNA Count 16
Contig Count 235
N50 Contigs 15,586 bp
Longest Contig 55,314 bp
Scaffold Count 49
N50 Scaffolds 288,743 bp
Longest Scaffold 782,499 bp
Genome Size 2,020,582 bp
Protein Count 1,977
Coding Density 76.75%
GC Percentage 36.78%
Ambiguous Bases N/A
GTDB representative of species True
NCBI Metadata
Assembly Level Scaffold
Assembly Name ASM16085v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN00139430
Country None
Date 2009-9-22
Genbank Assembly Accession GCA_000160855.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source biological product [ENVO:02000043]
Latitude Longitude None
Molecule Count N/A
CDS Count 1,859
Refseq Category na
Seq Rel Date 2009/09/22
Spanned Gaps 186
Species Taxid 1587
SSU Count 1
Submitter Baylor College of Medicine
Taxid 585520
Total Gap Length 211915
Translation Table 11
tRNA Count (total) 46
Type Material assembly from type material
Unspanned Gaps 0
Version Status latest
WGS Master ACLM00000000.1