Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes_A; c__Clostridia; o__Lachnospirales; f__Lachnospiraceae; g__Catonella; s__Catonella morbi
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Clostridia; o__Clostridiales; f__Lachnospiraceae; g__Catonella; s__Catonella morbi
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Clostridia; o__Clostridiales; f__Lachnospiraceae; g__Catonella; s__Catonella morbi; x__Catonella morbi ATCC 51271
NCBI Strain Identifiers ATCC 51271
GTDB Type Material Designation type strain of species
GTDB Representative of Species True (1 genome in species cluster)
Genome Characteristics
CheckM Completeness 99.55%
CheckM Contamination 1.34%
CheckM Strain Heterogeneity 0.0
5S Count 4
16S Count 5
23S Count 6
tRNA Count 20
Contig Count 26
N50 Contigs 329,958 bp
Longest Contig 708,930 bp
Scaffold Count 8
N50 Scaffolds 772,742 bp
Longest Scaffold 814,431 bp
Genome Size 3,479,204 bp
Protein Count 3,102
Coding Density 88.13%
GC Percentage 37.14%
Ambiguous Bases N/A
GTDB representative of species True
NCBI Metadata
Assembly Level Scaffold
Assembly Name ASM16003v2
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02436865
Country None
Date 2013-10-31
Genbank Assembly Accession GCA_000160035.2
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source gingival crevice
Latitude Longitude None
Molecule Count N/A
CDS Count 3,095
Refseq Category representative genome
Seq Rel Date 2013/10/31
Spanned Gaps 18
Species Taxid 43997
SSU Count 4
Submitter Washington University Genome Sequencing Center
Taxid 592026
Total Gap Length 1800
Translation Table 11
tRNA Count (total) 43
Type Material assembly from type material
Unspanned Gaps 0
Version Status latest
WGS Master ACIL00000000.3