Veillonella dispar
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes_C; c__Negativicutes; o__Veillonellales; f__Veillonellaceae; g__Veillonella; s__Veillonella dispar
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Negativicutes; o__Veillonellales; f__Veillonellaceae; g__Veillonella; s__Veillonella dispar
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Negativicutes; o__Veillonellales; f__Veillonellaceae; g__Veillonella; s__Veillonella dispar; x__Veillonella dispar ATCC 17748
NCBI Strain Identifiers ATCC 17748
GTDB Type Material Designation type strain of species
GTDB Representative of Species False (representative is GCA_900637515.1)
Genome Characteristics
CheckM Completeness 100.0%
CheckM Contamination 0.0%
CheckM Strain Heterogeneity 0.0
5S Count 5
16S Count 4
23S Count 5
tRNA Count 20
Contig Count 25
N50 Contigs 498,249 bp
Longest Contig 643,437 bp
Scaffold Count 3
N50 Scaffolds 1,555,587 bp
Longest Scaffold 1,555,587 bp
Genome Size 2,118,767 bp
Protein Count 1,936
Coding Density 87.07%
GC Percentage 38.86%
Ambiguous Bases N/A
GTDB representative GCA_900637515.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name ASM16001v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN00008863
Country None
Date 2009-5-8
Genbank Assembly Accession GCA_000160015.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source biological product [ENVO:02000043]
Latitude Longitude None
Molecule Count N/A
CDS Count 1,926
Refseq Category na
Seq Rel Date 2009/05/08
Spanned Gaps 22
Species Taxid 39778
SSU Count 3
Submitter Washington University Genome Sequencing Center
Taxid 546273
Total Gap Length 2200
Translation Table 11
tRNA Count (total) 50
Type Material assembly from type material
Unspanned Gaps 0
Version Status latest
WGS Master ACIK00000000.2