Fusobacterium_A varium
Isolate HQ 5S/16S/23S 19 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Fusobacteriota; c__Fusobacteriia; o__Fusobacteriales; f__Fusobacteriaceae; g__Fusobacterium_A; s__Fusobacterium_A varium
Filtered NCBI Taxonomy d__Bacteria; p__Fusobacteria; c__Fusobacteriia; o__Fusobacteriales; f__Fusobacteriaceae; g__Fusobacterium; s__Fusobacterium varium
Unfiltered NCBI Taxonomy d__Bacteria; p__Fusobacteria; c__Fusobacteriia; o__Fusobacteriales; f__Fusobacteriaceae; g__Fusobacterium; s__Fusobacterium varium; x__Fusobacterium varium ATCC 27725
NCBI Strain Identifiers ATCC 27725
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_900637705.1)
Genome Characteristics
CheckM Completeness 98.83%
CheckM Contamination 1.12%
CheckM Strain Heterogeneity 0.0
5S Count 6
16S Count 2
23S Count 3
tRNA Count 19
Contig Count 39
N50 Contigs 150,312 bp
Longest Contig 363,165 bp
Scaffold Count 11
N50 Scaffolds 496,135 bp
Longest Scaffold 1,316,816 bp
Genome Size 3,299,801 bp
Protein Count 3,087
Coding Density 87.29%
GC Percentage 29.18%
Ambiguous Bases N/A
GTDB representative GCA_900637705.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name Fuso_varium_ATCC_27725_V2
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02463688
Country None
Date 2011-7-27
Genbank Assembly Accession GCA_000159915.2
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source biological product [ENVO:02000043]
Latitude Longitude None
Molecule Count N/A
CDS Count 3,020
Refseq Category na
Seq Rel Date 2011/07/27
Spanned Gaps 28
Species Taxid 856
SSU Count 4
Submitter Broad Institute
Taxid 469618
Total Gap Length 2800
Translation Table 11
tRNA Count (total) 54
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master ACIE00000000.2