Lentilactobacillus hilgardii
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Lactobacillaceae; g__Lentilactobacillus; s__Lentilactobacillus hilgardii
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Lactobacillaceae; g__Lactobacillus; s__Lactobacillus brevis
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Lactobacillaceae; g__Lactobacillus; s__Lactobacillus brevis; sb__Lactobacillus brevis subsp. gravesensis; x__Lactobacillus brevis subsp. gravesensis ATCC 27305
NCBI Strain Identifiers ATCC 27305
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000159315.1)
Genome Characteristics
CheckM Completeness 99.38%
CheckM Contamination 0.31%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 178
N50 Contigs 95,113 bp
Longest Contig 465,478 bp
Scaffold Count 106
N50 Scaffolds 737,616 bp
Longest Scaffold 1,433,332 bp
Genome Size 3,144,656 bp
Protein Count 2,915
Coding Density 82.62%
GC Percentage 39.99%
Ambiguous Bases 5
GTDB representative GCA_000159315.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name ASM15917v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN00001468
Country None
Date 2009-5-28
Genbank Assembly Accession GCA_000159175.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source biological product [ENVO:02000043]
Latitude Longitude None
Molecule Count N/A
CDS Count 2,913
Refseq Category na
Seq Rel Date 2009/05/28
Spanned Gaps 72
Species Taxid 1580
SSU Count 1
Submitter Baylor College of Medicine
Taxid 525310
Total Gap Length 66941
Translation Table 11
tRNA Count (total) 57
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master ACGG00000000.1