Fusobacterium periodonticum_D
Isolate HQ 5S/16S/23S 19 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Fusobacteriota; c__Fusobacteriia; o__Fusobacteriales; f__Fusobacteriaceae; g__Fusobacterium; s__Fusobacterium periodonticum_D
Filtered NCBI Taxonomy d__Bacteria; p__Fusobacteria; c__Fusobacteriia; o__Fusobacteriales; f__Fusobacteriaceae; g__Fusobacterium; s__Fusobacterium periodonticum
Unfiltered NCBI Taxonomy d__Bacteria; p__Fusobacteria; c__Fusobacteriia; o__Fusobacteriales; f__Fusobacteriaceae; g__Fusobacterium; s__Fusobacterium periodonticum; x__Fusobacterium periodonticum 2_1_31
NCBI Strain Identifiers 2_1_31
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_002763915.1)
Genome Characteristics
CheckM Completeness 100.0%
CheckM Contamination 0.56%
CheckM Strain Heterogeneity 0.0
5S Count 4
16S Count 3
23S Count 4
tRNA Count 19
Contig Count 61
N50 Contigs 96,996 bp
Longest Contig 274,631 bp
Scaffold Count 6
N50 Scaffolds 810,876 bp
Longest Scaffold 980,607 bp
Genome Size 2,546,312 bp
Protein Count 2,347
Coding Density 86.39%
GC Percentage 28.05%
Ambiguous Bases N/A
GTDB representative GCA_002763915.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name Fuso_sp_2_1_31_V3
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02463707
Country None
Date 2014-9-25
Genbank Assembly Accession GCA_000158215.3
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source biological product [ENVO:02000043]
Latitude Longitude None
Molecule Count N/A
CDS Count 2,403
Refseq Category representative genome
Seq Rel Date 2014/09/25
Spanned Gaps 55
Species Taxid 860
SSU Count 4
Submitter Broad Institute
Taxid 469599
Total Gap Length 73455
Translation Table 11
tRNA Count (total) 50
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master ACDC00000000.3