Francisella philomiragia
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Francisellales; f__Francisellaceae; g__Francisella; s__Francisella philomiragia
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Thiotrichales; f__Francisellaceae; g__Francisella; s__Francisella philomiragia
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Thiotrichales; f__Francisellaceae; g__Francisella; s__Francisella philomiragia; x__Francisella philomiragia subsp. philomiragia ATCC 25015
NCBI Strain Identifiers ATCC 25015
GTDB Type Material Designation type strain of species
GTDB Representative of Species True (9 genomes in species cluster)
Genome Characteristics
CheckM Completeness 99.62%
CheckM Contamination 0.0%
CheckM Strain Heterogeneity 0.0
5S Count 2
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 30
N50 Contigs 219,590 bp
Longest Contig 392,366 bp
Scaffold Count 17
N50 Scaffolds 504,089 bp
Longest Scaffold 859,211 bp
Genome Size 1,999,684 bp
Protein Count 1,883
Coding Density 92.13%
GC Percentage 32.52%
Ambiguous Bases N/A
GTDB representative of species True
NCBI Metadata
Assembly Level Scaffold
Assembly Name ASM15671v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02595237
Country None
Date 2008-12-23
Genbank Assembly Accession GCA_000156715.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 1,870
Refseq Category na
Seq Rel Date 2008/12/23
Spanned Gaps 13
Species Taxid 28110
SSU Count 1
Submitter Broad Institute
Taxid 539329
Total Gap Length 13706
Translation Table 11
tRNA Count (total) 35
Type Material assembly from type material
Unspanned Gaps 0
Version Status latest
WGS Master ABYY00000000.1