Leisingera daeponensis
Isolate HQ 5S/16S/23S 19 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Rhodobacterales; f__Rhodobacteraceae; g__Leisingera; s__Leisingera daeponensis
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Rhodobacterales; f__; g__; s__
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Rhodobacterales; x__unclassified Rhodobacterales; s__Rhodobacterales bacterium Y4I
NCBI Strain Identifiers Y4I
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000473145.1)
Genome Characteristics
CheckM Completeness 99.47%
CheckM Contamination 0.0%
CheckM Strain Heterogeneity 0.0
5S Count 4
16S Count 4
23S Count 4
tRNA Count 19
Contig Count 63
N50 Contigs 149,686 bp
Longest Contig 254,472 bp
Scaffold Count 5
N50 Scaffolds 3,912,481 bp
Longest Scaffold 3,912,481 bp
Genome Size 4,344,244 bp
Protein Count 4,102
Coding Density 87.34%
GC Percentage 64.43%
Ambiguous Bases N/A
GTDB representative GCA_000473145.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name ASM15613v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02436180
Country None
Date 2008-9-25
Genbank Assembly Accession GCA_000156135.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 4,106
Refseq Category na
Seq Rel Date 2008/09/25
Spanned Gaps 58
Species Taxid 439496
SSU Count 4
Submitter Moore Foundation
Taxid 439496
Total Gap Length 17904
Translation Table 11
tRNA Count (total) 56
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master ABXF00000000.1