Octadecabacter antarcticus
Isolate HQ 5S/16S/23S 19 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Rhodobacterales; f__Rhodobacteraceae; g__Octadecabacter; s__Octadecabacter antarcticus
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Rhodobacterales; f__Rhodobacteraceae; g__Octadecabacter; s__Octadecabacter antarcticus
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Rhodobacterales; f__Rhodobacteraceae; g__Octadecabacter; s__Octadecabacter antarcticus; x__Octadecabacter antarcticus 307
NCBI Strain Identifiers 307
GTDB Type Material Designation type strain of species
GTDB Representative of Species True (1 genome in species cluster)
Genome Characteristics
CheckM Completeness 99.39%
CheckM Contamination 0.35%
CheckM Strain Heterogeneity 0.0
5S Count 2
16S Count 2
23S Count 2
tRNA Count 19
Contig Count 2
N50 Contigs 4,812,600 bp
Longest Contig 4,812,600 bp
Scaffold Count 2
N50 Scaffolds 4,812,600 bp
Longest Scaffold 4,812,600 bp
Genome Size 4,875,481 bp
Protein Count 5,307
Coding Density 85.69%
GC Percentage 54.62%
Ambiguous Bases N/A
GTDB representative of species True
NCBI Metadata
Assembly Level Complete Genome
Assembly Name ASM15567v2
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02603621
Country Antarctica: McMurdo Sound
Date 2013-4-8
Genbank Assembly Accession GCA_000155675.2
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude 77.88 S 166.58 E
Molecule Count 2
CDS Count 5,007
Refseq Category na
Seq Rel Date 2013/04/08
Spanned Gaps 0
Species Taxid 1217908
SSU Count 2
Submitter Moore Foundation
Taxid 391626
Total Gap Length 0
Translation Table 11
tRNA Count (total) 42
Type Material assembly from type material
Unspanned Gaps 0
Version Status latest
WGS Master None