Streptomyces sp000412265
Isolate MQ 5S/16S/23S 18 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Actinobacteriota; c__Actinomycetia; o__Streptomycetales; f__Streptomycetaceae; g__Streptomyces; s__Streptomyces sp000412265
Filtered NCBI Taxonomy d__Bacteria; p__Actinobacteria; c__Actinobacteria; o__Streptomycetales; f__Streptomycetaceae; g__Streptomyces; s__
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Actinobacteria; c__Actinobacteria; o__Streptomycetales; f__Streptomycetaceae; g__Streptomyces; s__Streptomyces sp. Mg1
NCBI Strain Identifiers Mg1
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000412265.2)
Genome Characteristics
CheckM Completeness 84.47%
CheckM Contamination 2.39%
CheckM Strain Heterogeneity 41.67
5S Count 4
16S Count 6
23S Count 6
tRNA Count 18
Contig Count 466
N50 Contigs 25,079 bp
Longest Contig 322,987 bp
Scaffold Count 127
N50 Scaffolds 103,660 bp
Longest Scaffold 580,333 bp
Genome Size 7,260,368 bp
Protein Count 6,702
Coding Density 83.28%
GC Percentage 71.17%
Ambiguous Bases N/A
GTDB representative GCA_000412265.2
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name ASM15488v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02595219
Country None
Date 2008-03-04
Genbank Assembly Accession GCA_000154885.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 6,623
Refseq Category na
Seq Rel Date 2008/03/04
Spanned Gaps 339
Species Taxid 465541
SSU Count 3
Submitter Broad Institute
Taxid 465541
Total Gap Length 154645
Translation Table 11
tRNA Count (total) 58
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master ABJF00000000.1