Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Vibrionaceae; g__Vibrio; s__Vibrio campbellii
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Vibrionales; f__Vibrionaceae; g__Vibrio; s__Vibrio campbellii
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Vibrionales; f__Vibrionaceae; g__Vibrio; x__Vibrio harveyi group; s__Vibrio campbellii; x__Vibrio campbellii HY01
NCBI Strain Identifiers HY01
GTDB Type Material Designation not type material
GTDB Representative of Species False
Genome Characteristics
CheckM Completeness 86.05%
CheckM Contamination 0.77%
CheckM Strain Heterogeneity 0.0
5S Count 5
16S Count 11
23S Count 12
tRNA Count 18
Contig Count 349
N50 Contigs 60,816 bp
Longest Contig 317,745 bp
Scaffold Count 205
N50 Scaffolds 140,557 bp
Longest Scaffold 474,850 bp
Genome Size 5,415,385 bp
Protein Count 4,934
Coding Density 84.91%
GC Percentage 45.56%
Ambiguous Bases 0
GTDB representative GCF_002163755.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name ASM15402v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02435842
Country None
Date 2007-2-1
Genbank Assembly Accession GCA_000154025.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count 0
Protein Count 5,052
Refseq Category na
Seq Rel Date 2007/02/01
Spanned Gaps 144
Species Taxid 680
SSU Count 10
Submitter TIGR
Taxid 410291
Total Gap Length 14400
Translation Table 11
tRNA Count (total) 62
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master AAWP00000000.1