Synechococcus_E sp000153805
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Cyanobacteria; c__Cyanobacteriia; o__PCC-6307; f__Cyanobiaceae; g__Synechococcus_E; s__Synechococcus_E sp000153805
Filtered NCBI Taxonomy d__Bacteria; p__Cyanobacteria; c__; o__Synechococcales; f__Synechococcaceae; g__Synechococcus; s__
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; x__Cyanobacteria/Melainabacteria group; p__Cyanobacteria; o__Synechococcales; f__Synechococcaceae; g__Synechococcus; s__Synechococcus sp. BL107
NCBI Strain Identifiers BL107
GTDB Type Material Designation not type material
GTDB Representative of Species True (1 genome in species cluster)
Genome Characteristics
CheckM Completeness 99.46%
CheckM Contamination 0.0%
CheckM Strain Heterogeneity 0.0
5S Count 2
16S Count 2
23S Count 2
tRNA Count 20
Contig Count 6
N50 Contigs 725,965 bp
Longest Contig 916,208 bp
Scaffold Count 1
N50 Scaffolds 2,285,034 bp
Longest Scaffold 2,285,034 bp
Genome Size 2,285,034 bp
Protein Count 2,516
Coding Density 90.01%
GC Percentage 54.24%
Ambiguous Bases N/A
GTDB representative of species True
NCBI Metadata
Assembly Level Scaffold
Assembly Name ASM15380v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02436154
Country None
Date 2006-10-23
Genbank Assembly Accession GCA_000153805.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 2,392
Refseq Category na
Seq Rel Date 2006/10/23
Spanned Gaps 5
Species Taxid 313625
SSU Count 2
Submitter The Gordon and Betty Moore Foundation Marine Microbiology Initiative
Taxid 313625
Total Gap Length 1657
Translation Table 11
tRNA Count (total) 42
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master AATZ00000000.1