Polaribacter irgensii
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Bacteroidota; c__Bacteroidia; o__Flavobacteriales; f__Flavobacteriaceae; g__Polaribacter; s__Polaribacter irgensii
Filtered NCBI Taxonomy d__Bacteria; p__Bacteroidetes; c__Flavobacteriia; o__Flavobacteriales; f__Flavobacteriaceae; g__Polaribacter; s__Polaribacter irgensii
Unfiltered NCBI Taxonomy d__Bacteria; x__FCB group; x__Bacteroidetes/Chlorobi group; p__Bacteroidetes; c__Flavobacteriia; o__Flavobacteriales; f__Flavobacteriaceae; g__Polaribacter; s__Polaribacter irgensii; x__Polaribacter irgensii 23-P
NCBI Strain Identifiers 23-P
GTDB Type Material Designation type strain of species
GTDB Representative of Species True (1 genome in species cluster)
Genome Characteristics
CheckM Completeness 99.33%
CheckM Contamination 0.34%
CheckM Strain Heterogeneity 0.0
5S Count 3
16S Count 3
23S Count 3
tRNA Count 20
Contig Count 7
N50 Contigs 927,669 bp
Longest Contig 984,798 bp
Scaffold Count 2
N50 Scaffolds 2,753,184 bp
Longest Scaffold 2,753,184 bp
Genome Size 2,763,458 bp
Protein Count 2,425
Coding Density 85.37%
GC Percentage 34.52%
Ambiguous Bases N/A
GTDB representative of species True
NCBI Metadata
Assembly Level Scaffold
Assembly Name ASM15322v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02436114
Country None
Date 2006-05-04
Genbank Assembly Accession GCA_000153225.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 2,420
Refseq Category representative genome
Seq Rel Date 2006/05/04
Spanned Gaps 5
Species Taxid 531
SSU Count 2
Submitter The Gordon and Betty Moore Foundation Marine Microbiology Initiative
Taxid 313594
Total Gap Length 18000
Translation Table 11
tRNA Count (total) 37
Type Material assembly from type material
Unspanned Gaps 0
Version Status latest
WGS Master AAOG00000000.1