Reinekea blandensis
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Pseudomonadales; f__Saccharospirillaceae; g__Reinekea; s__Reinekea blandensis
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Oceanospirillales; f__Saccharospirillaceae; g__Reinekea; s__Reinekea blandensis
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Oceanospirillales; f__Saccharospirillaceae; g__Reinekea; s__Reinekea blandensis; x__Reinekea blandensis MED297
NCBI Strain Identifiers MED297
GTDB Type Material Designation type strain of species
GTDB Representative of Species True (1 genome in species cluster)
Genome Characteristics
CheckM Completeness 97.69%
CheckM Contamination 2.23%
CheckM Strain Heterogeneity 0.0
5S Count 4
16S Count 4
23S Count 4
tRNA Count 20
Contig Count 61
N50 Contigs 138,959 bp
Longest Contig 480,486 bp
Scaffold Count 10
N50 Scaffolds 681,639 bp
Longest Scaffold 1,154,124 bp
Genome Size 4,526,761 bp
Protein Count 4,148
Coding Density 88.98%
GC Percentage 52.35%
Ambiguous Bases N/A
GTDB representative of species True
NCBI Metadata
Assembly Level Scaffold
Assembly Name ASM15318v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02436140
Country None
Date 2006-05-04
Genbank Assembly Accession GCA_000153185.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 4,137
Refseq Category representative genome
Seq Rel Date 2006/05/04
Spanned Gaps 51
Species Taxid 374838
SSU Count 4
Submitter The Gordon and Betty Moore Foundation Marine Microbiology Initiative
Taxid 314283
Total Gap Length 20430
Translation Table 11
tRNA Count (total) 51
Type Material assembly from type material
Unspanned Gaps 0
Version Status latest
WGS Master AAOE00000000.1