Rhodoglobus sp000153145
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Actinobacteriota; c__Actinomycetia; o__Actinomycetales; f__Microbacteriaceae; g__Rhodoglobus; s__Rhodoglobus sp000153145
Filtered NCBI Taxonomy d__Bacteria; p__Actinobacteria; c__Actinobacteria; o__; f__; g__; s__
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Actinobacteria; c__Actinobacteria; x__unclassified Actinobacteria (class); x__unclassified Actinobacteria (class) (miscellaneous); s__marine actinobacterium PHSC20C1
NCBI Strain Identifiers PHSC20C1
GTDB Type Material Designation not type material
GTDB Representative of Species True (1 genome in species cluster)
Genome Characteristics
CheckM Completeness 99.24%
CheckM Contamination 0.51%
CheckM Strain Heterogeneity 0.0
5S Count 2
16S Count 2
23S Count 2
tRNA Count 20
Contig Count 23
N50 Contigs 288,661 bp
Longest Contig 343,163 bp
Scaffold Count 1
N50 Scaffolds 2,772,187 bp
Longest Scaffold 2,772,187 bp
Genome Size 2,772,187 bp
Protein Count 2,666
Coding Density 92.66%
GC Percentage 59.09%
Ambiguous Bases N/A
GTDB representative of species True
NCBI Metadata
Assembly Level Scaffold
Assembly Name ASM15314v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02436159
Country None
Date 2006-4-11
Genbank Assembly Accession GCA_000153145.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 2,634
Refseq Category representative genome
Seq Rel Date 2006/04/11
Spanned Gaps 22
Species Taxid 312284
SSU Count 2
Submitter The Gordon and Betty Moore Foundation Marine Microbiology Initiative
Taxid 312284
Total Gap Length 3175
Translation Table 11
tRNA Count (total) 44
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master AAOB00000000.1