Knoellia sp000152705
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Actinobacteriota; c__Actinomycetia; o__Actinomycetales; f__Dermatophilaceae; g__Knoellia; s__Knoellia sp000152705
Filtered NCBI Taxonomy d__Bacteria; p__Actinobacteria; c__Actinobacteria; o__Micrococcales; f__Intrasporangiaceae; g__Janibacter; s__
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Actinobacteria; c__Actinobacteria; o__Micrococcales; f__Intrasporangiaceae; g__Janibacter; s__Janibacter sp. HTCC2649
NCBI Strain Identifiers HTCC2649
GTDB Type Material Designation not type material
GTDB Representative of Species True (1 genome in species cluster)
Genome Characteristics
CheckM Completeness 99.73%
CheckM Contamination 0.18%
CheckM Strain Heterogeneity 100.0
5S Count 2
16S Count 2
23S Count 2
tRNA Count 20
Contig Count 14
N50 Contigs 1,148,204 bp
Longest Contig 1,392,061 bp
Scaffold Count 7
N50 Scaffolds 4,221,782 bp
Longest Scaffold 4,221,782 bp
Genome Size 4,235,068 bp
Protein Count 4,027
Coding Density 92.27%
GC Percentage 68.44%
Ambiguous Bases N/A
GTDB representative of species True
NCBI Metadata
Assembly Level Scaffold
Assembly Name ASM15270v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN00622971
Country None
Date 2006-04-07
Genbank Assembly Accession GCA_000152705.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 3,988
Refseq Category na
Seq Rel Date 2006/04/07
Spanned Gaps 7
Species Taxid 313589
SSU Count 2
Submitter The Gordon and Betty Moore Foundation Marine Microbiology Initiative
Taxid 313589
Total Gap Length 6345
Translation Table 11
tRNA Count (total) 45
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master AAMN00000000.1