Roseovarius nubinhibens
Isolate HQ 5S/16S/23S 19 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Rhodobacterales; f__Rhodobacteraceae; g__Roseovarius; s__Roseovarius nubinhibens
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Rhodobacterales; f__Rhodobacteraceae; g__Roseovarius; s__Roseovarius nubinhibens
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Rhodobacterales; f__Rhodobacteraceae; g__Roseovarius; s__Roseovarius nubinhibens; x__Roseovarius nubinhibens ISM
NCBI Strain Identifiers ISM
GTDB Type Material Designation type strain of species
GTDB Representative of Species True (3 genomes in species cluster)
Genome Characteristics
CheckM Completeness 99.75%
CheckM Contamination 0.3%
CheckM Strain Heterogeneity 0.0
5S Count 2
16S Count 2
23S Count 2
tRNA Count 19
Contig Count 10
N50 Contigs 1,888,291 bp
Longest Contig 1,888,291 bp
Scaffold Count 4
N50 Scaffolds 3,576,288 bp
Longest Scaffold 3,576,288 bp
Genome Size 3,676,244 bp
Protein Count 3,489
Coding Density 90.06%
GC Percentage 63.91%
Ambiguous Bases N/A
GTDB representative of species True
NCBI Metadata
Assembly Level Scaffold
Assembly Name ASM15262v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02436080
Country None
Date 2006-05-04
Genbank Assembly Accession GCA_000152625.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 3,478
Refseq Category representative genome
Seq Rel Date 2006/05/04
Spanned Gaps 6
Species Taxid 314263
SSU Count 2
Submitter The Gordon and Betty Moore Foundation Marine Microbiology Initiative
Taxid 89187
Total Gap Length 7577
Translation Table 11
tRNA Count (total) 45
Type Material assembly from type material
Unspanned Gaps 0
Version Status latest
WGS Master AALY00000000.1