Streptococcus pneumoniae
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Streptococcaceae; g__Streptococcus; s__Streptococcus pneumoniae
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Streptococcaceae; g__Streptococcus; s__Streptococcus pneumoniae
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Streptococcaceae; g__Streptococcus; s__Streptococcus pneumoniae; x__Streptococcus pneumoniae AP200
NCBI Strain Identifiers AP200
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_001457635.1)
Genome Characteristics
CheckM Completeness 99.54%
CheckM Contamination 0.26%
CheckM Strain Heterogeneity 0.0
5S Count 4
16S Count 4
23S Count 4
tRNA Count 20
Contig Count 1
N50 Contigs 2,130,580 bp
Longest Contig 2,130,580 bp
Scaffold Count 1
N50 Scaffolds 2,130,580 bp
Longest Scaffold 2,130,580 bp
Genome Size 2,130,580 bp
Protein Count 2,117
Coding Density 85.79%
GC Percentage 39.51%
Ambiguous Bases 1
GTDB representative GCA_001457635.1
GTDB representative of species False
NCBI Metadata
Assembly Level Complete Genome
Assembly Name ASM14697v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02603428
Country Italy
Date 2010-9-7
Genbank Assembly Accession GCA_000146975.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source cerebrospinal fluid of a patient with meningitis
Latitude Longitude None
Molecule Count 1
CDS Count 2,225
Refseq Category na
Seq Rel Date 2010/09/07
Spanned Gaps 0
Species Taxid 1313
SSU Count 4
Submitter Istituto di Teconologie Biomediche, Consiglio Nazionale delle Ricerche
Taxid 574093
Total Gap Length 0
Translation Table 11
tRNA Count (total) 54
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master None